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Integrating Biological Knowledge into Variable Selection

MATLAB code for exact Bayesian variable selection with prior selected and weighted by empirical Bayes, as described in:

Integrating biological knowledge into variable selection: an empirical Bayes approach with application in cancer biology open-access.gif highly-accessed.gif
S. M. Hill, R. M. Neve, N. Bayani, W-L. Kuo, S. Ziyad, P. T. Spellman, J. W. Gray and S. Mukherjee (2012)
BMC Bioinformatics 13:94

A simulation script is also included.
Data for cancer drug response application is available on request.

Download IBKVS.zip