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Recent Publications













Whalley T et al (2020) GPU-Accelerated Discovery of Pathogen-Derived Molecular Mimics of a T-Cell Insulin Epitope. Front. Immunol. 11:296. doi: 10.3389/fimmu.2020.00296

Whalley T, Dolton G, Brown PE, Wall A, Wooldridge L, van den Berg H, Fuller A, Hopkins JR, Crowther MD, Attaf M, Knight RR, Cole DK, Peakman M, Sewell AK and Szomolay B (2020) GPU-Accelerated Discovery of Pathogen-Derived Molecular Mimics of a T-Cell Insulin Epitope. Front. Immunol. 11:296. doi: 10.3389/fimmu.2020.00296

Fri 06 Mar 2020, 11:13




Castaño, MS, et al (2020). Assessing the impact of aggregating disease stage data in model predictions of human African trypanosomiasis transmission and control activities in Bandundu province (DRC). PLoS neglected tropical diseases, 14(1), e0007976

Castaño, MS, Ndeffo-Mbah, ML, Rock, KS, Palmer, C, Knock, E, Miaka, EM, Ndung’u, JM, Torr, S, Verlé, P, Spencer, SEF, Galvani, A, Bever, C, Keeling, MJ, Chitnis, N (2020). Assessing the impact of aggregating disease stage data in model predictions of human African trypanosomiasis transmission and control activities in Bandundu province (DRC). PLoS neglected tropical diseases, 14(1), e0007976. doi: 10.1371/journal.pntd.0007976

Tue 21 Jan 2020, 11:15
























Criscuolo, A; Issenhuth-Jeanjean, S; Didelot, X; Thorell, K; Hale, J; Parkhill, J; Thomson, NR; Weill, FX; Falush, D; Brisse, S (2019) The speciation and hybridization history of the genus Salmonella. Microbial Genomics. 5 10.1099/mgen.0.000284

Criscuolo, A; Issenhuth-Jeanjean, S; Didelot, X; Thorell, K; Hale, J; Parkhill, J; Thomson, NR; Weill, FX; Falush, D; Brisse, S (2019) The speciation and hybridization history of the genus Salmonella. Microbial Genomics. 5 10.1099/mgen.0.000284

Fri 20 Sep 2019, 12:48


Ward et al (2019) Targeted deep sequencing of urothelial bladder cancers and associated urinary DNA: a 23-gene panel with utility for non-invasive diagnosis and risk stratification. BJU International 124 532-544

Ward, DG; Gordon, NS; Boucher, RH; Pirrie, SJ; Baxter, L; Ott, S; Silcock, L; Whalley, CM; Stockton, JD; Beggs, AD; Griffiths, M; Abbotts, B; Ijakipour, H; Latheef, FN; Robinson, RA; White, AJ; James, ND; Zeegers, MP; Cheng, KK; Bryan, RT (2019) Targeted deep sequencing of urothelial bladder cancers and associated urinary DNA: a 23-gene panel with utility for non-invasive diagnosis and risk stratification. BJU International 124 532-544

Fri 20 Sep 2019, 12:43




Momiji; Hassall; Featherstone; McNamara; Patist; Spiller; Christian; White; Davis; Finkenstadt; Rand (2019) Disentangling juxtacrine from paracrine signalling in dynamic tissue. PLoS Comp Biol. 15 10.1371/journal.pcbi.1007030

Momiji, H; Hassall, KL; Featherstone, K; McNamara, AV; Patist, AL; Spiller, DG; Christian, HC; White, MRH; Davis, JRE; Finkenstadt, BF; Rand, DA (2019) Disentangling juxtacrine from paracrine signalling in dynamic tissue. PLoS Comp Biol. 15 10.1371/journal.pcbi.1007030

Tue 06 Aug 2019, 12:28




















van Dorp; Wang; Shaw; Acman; Brynildsrud; Eldholm; Wang; Gao; Yin; Chen; Ding; Farrer; Didelot; Balloux; Wang (2019) Rapid phenotypic evolution in multidrug-resistant Klebsiella pneumoniae hospital outbreak strains. Microbial Genomics 5

van Dorp, L; Wang, Q; Shaw, LP; Acman, M; Brynildsrud, OB; Eldholm, V; Wang, RB; Gao, H; Yin, YY; Chen, HB; Ding, CL; Farrer, RA; Didelot, X; Balloux, F; Wang, H (2019) Rapid phenotypic evolution in multidrug-resistant Klebsiella pneumoniae hospital outbreak strains. Microbial Genomics 5 10.1099/mgen.0.000263

Thu 16 May 2019, 11:27



Dingle, KE; Didelot, X; et al. (2019) A Role for Tetracycline Selection in Recent Evolution of Agriculture-Associated Clostridium difficile PCR Ribotype 078 MBio 10 10.1128/mBio.02790-18

Dingle, KE; Didelot, X; Quan, TP; Eyre, DW; Stoesser, N; Marwick, CA; Coia, J; Brown, D; Buchanan, S; Ijaz, UZ; Goswami, C; Douce, G; Fawley, WN; Wilcox, MH; Peto, TEA; Walker, AS; Crook, DW (2019) A Role for Tetracycline Selection in Recent Evolution of Agriculture-Associated Clostridium difficile PCR Ribotype 078 MBio 10 10.1128/mBio.02790-18

Fri 03 May 2019, 07:52






Seedat; et al (2019) Universal antenatal screening for group B streptococcus may cause more harm than good. British Medical Journal. 364 10.1136/bmj.l463

Seedat, F; Geppert, J; Stinton, C; Patterson, J; Freeman, K; Johnson, SA; Fraser, H; Brown, CS; Uthman, OA; Tan, B; Robinson, ER; McCarthy, ND; Clarke, A; Marshall, J; Visintin, C; Mackie, A; Taylor-Phillips, S (2019) Universal antenatal screening for group B streptococcus may cause more harm than good. British Medical Journal. 364 10.1136/bmj.l463

Thu 14 Mar 2019, 07:55





Widlak, MM; et al (2018) Risk stratification of symptomatic patients suspected of colorectal cancer using faecal and urinary markers. Colorectal Disease. 20 O335-O342

Widlak, MM; Neal, M; Daulton, E; Thomas, CL; Tomkins, C; Singh, B; Harmston, C; Wicaksono, A; Evans, C; Smith, S; Savage, RS; Covington, JA; Arasaradnam, RP (2018) Risk stratification of symptomatic patients suspected of colorectal cancer using faecal and urinary markers. Colorectal Disease. 20 O335-O342

Mon 07 Jan 2019, 09:35

Hill, EM et al (2018) The impact of surveillance and control on highly pathogenic avian influenza outbreaks in poultry in Dhaka division, Bangladesh. PLoS Comp. Bio. 14 1006439

Hill, EM; House, T; Dhingra, MS; Kalpravidh, W; Morzaria, S; Osmani, MG; Brum, E; Yamage, M; Kalam, MA; Prosser, DJ; Takekawa, JY; Xiao, XM; Gilbert, M; Tildesley, MJ (2018) The impact of surveillance and control on highly pathogenic avian influenza outbreaks in poultry in Dhaka division, Bangladesh. PLoS Comp. Bio. 14 10.1371/journal.pcbi.1006439

Thu 06 Dec 2018, 08:29

Seedat; Brown; Stinton; Patterson; Geppert; Freeman; Tan; Johnson; Fraser; Uthman; Robinson; McCarthy; Clarke; Taylor-Phillips (2018) Bacterial Load and Molecular Markers Associated With Early-onset Group B Streptococcus. Ped. Inf. Dis. J. 37 E306-E314

Seedat, F; Brown, CS; Stinton, C; Patterson, J; Geppert, J; Freeman, K; Tan, B; Johnson, SA; Fraser, H; Uthman, OA; Robinson, ER; McCarthy, ND; Clarke, A; Taylor-Phillips, S (2018) Bacterial Load and Molecular Markers Associated With Early-onset Group B Streptococcus: A Systematic Review and Meta-analysis. Pediatric Infectious Disease Journal 37 E306-E314

Thu 06 Dec 2018, 08:26



















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