This program searches for phylogenetic mosaicism among groups of related sequences.

First create an alignment of each of your groups of sequences, in FASTA format. Programs such as MUSCLE and CLUSTALW create suitable alignments.

TreeMos searches your set of group alignments for phylogenetic anomalies. Mosaicism is inferred where a segment of a sequence from one alignment group is more similar to a segment of a sequence in a different alignment group, than it is to its nearest ingroup neighbour. Please see the paper in Evolutionary Bioinformatics for full details of the process.

Phylogenetic anomalies among your groups are visualised, and data can be exported for further analysis.

1. Please choose file(s) containing your alignments of each group of sequences, in FASTA format, and add each one to the queue: