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What's Going On? AI-Driven behavioural phenomics and multiomics revealing evolutionary responses to mixtures in resurrected Daphnia magna
Secondary Supervisor(s): Prof Luisa Orsini
University of Registration: University of Birmingham
BBSRC Research Themes:
Project Outline
Persistent and mobile chemicals, including perfluoroalkyl and polyfluoroalkyl substances (PFAS), are an increasing threat to freshwater ecosystems because they persist in the environment, move easily through water, and accumulate in food webs. Understanding how species respond and adapt to these pollutants is essential for predicting and managing their ecological impacts.
This project will investigate evolutionary responses to chemical pollution using resurrected and contemporary populations of the freshwater crustacean Daphnia magna. Resurrected populations recovered from sediment archives provide a unique opportunity to compare historical and modern responses to pollution across evolutionary timescales. Using artificial intelligence and machine vision based on YOLO, the project will automatically analyse behavioural responses of Daphnia exposed to PFAS and realistic chemical mixtures. High-throughput video analysis will quantify traits including swimming behaviour, heart rate, and stress responses, providing sensitive indicators of toxicity.
Behavioural data and omic data from mixtures will be integrated with transcriptomic and metabolomic datasets from the Horizon project PrecisionTox to identify the molecular pathways associated with pollutant detection, tolerance, accumulation, and detoxification. Statistical modelling will be used to identify phenotypic and molecular signatures linked to resilience or susceptibility to chemical exposure. The project will provide new insights into how freshwater organisms adapt to emerging pollutants and will contribute to the development of more sensitive approaches for environmental monitoring. In the longer term, the findings will support future functional genomics research and the development of enhanced biological systems for detecting and managing persistent chemical pollution.