Software Downloads
Network Interference Analysis and Correction Software (Ying Wang, David A. Hodgson, Miriam L. Gifford & Nigel J. Burroughs)
An implementation of the method described in our paper "Correcting for link loss in causal network inference caused by regulator interference" submitted to Bioinformatics. This method defines causal networks corrected for the problem of interference between dynamically similar regulators within the context of a sparse linear auto-regression model. Test data is provided within the NIACS software package. Please see the file NIACS_Documentation.pdf contained within the package for details on how to run the software.
Requirements: The R programming language