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Professor Sascha Ott - Recent Publications

Inform-Bladder

"Highly Sensitive and Specific Detection of Bladder Cancer via Targeted Ultra-deep Sequencing of Urinary DNA”, Douglas G Ward, Laura Baxter, Sascha Ott, Naheema S Gordon, Junhui Wang, Prashant Patel, Kim Piechocki, Lee Silcock, Chris Sale, Maurice P Zeegers, K K Cheng, Nicholas D James, Richard T Bryan, BladderPath Trial Management Group, European Urology Oncology, accepted, 2022
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Methylation paper

“Immediate perturbation of DNA methylation upon acute prenatal alcohol exposure in the mouse developing brain cortex”, Agathe Duchateau, Névé Auperin, Federico Miozzo, Anne Le Mouel, Olivier Kirsh, Myriame Mohamed, Sascha Ott, Délara Saberan-Djoneidi, Valérie Mezger, bioRxiv, 2022
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EndoTime Wordle

“EndoTime: Non-categorical timing estimates for luteal endometrium”, Julia Lipecki, Andrew E Mitchell, Jo Muter, Emma S Lucas, Komal Makwana, Katherine Fishwick, Joshua Odendaal, Amelia Hawkes, Pavle Vrljicak, Jan J Brosens, Sascha Ott, Human Reproduction, 37: 747–761, 2022

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PDAC Wordle

“Macrophage and Neutrophil Interactions in the Pancreatic Tumor Microenvironment Drive the Pathogenesis of Pancreatic Cancer”, Hillary G Pratt, Kayla J Steinberger, Nicole E Mihalik, Sascha Ott, Thomas Whalley, Barbara Szomolay, Brian A Boone, Timothy D Eubank, Cancers, 14: 194, 2022
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LHY nodulation Wordle

”Plant circadian clock control of Medicago truncatula nodulation via regulation of Nodule Cysteine-Rich peptides”, M. Achom, P. Roy, B. Lagunas, E. Picot, L. Richards, R. Bonyadi-Pour, A.J. Pardal, L. Baxter, B. Richmond, Aschauer, E. Fletcher, M. Rowson, J. Blackwell, C. Rich-Griffin, K.S. Mysore, J. Wen, S. Ott, I.A. Carré, M.L. Gifford, Journal of Experimental Botany, 73: 2142–2156, 2021
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MIS-C

“The immune landscape of SARS-CoV-2-associated Multisystem Inflammatory Syndrome in Children (MIS-C) from acute disease to recovery”, Eleni Syrimi, Eanna Fennell, Alex Richter, Pavle Vrljicak, Richard Stark, Sascha Ott, Paul G Murray, Eslam Al-Abadi, Ashish Chikermane, Pamela Dawson, Scott Hackett, Deepthi Jyothish, Hari Krishnan Kanthimathinathan, Sean Monaghan, Prasad Nagakumar, Barnaby R Scholefield, Steven Welch, Naeem Khan, Sian Faustini, Kate Davies, Wioleta M Zelek, Pamela Kearns, Graham S Taylor, iScience, 24: 103215, 2021
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Gata2a Wordle

“Gata2a maintains cebpa and npm1a in haematopoietic stem cells to sustain lineage differentiation and genome stability”, Christopher B Mahony, Boris Noyvert, Pavle Vrljicak, Sascha Ott, Martin Higgs, Rui Monteiro, bioRxiv, 2021
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UspABC

“Biochemical and phenotypic characterisation of the Mycobacterium smegmatis transporter UspABC”, Magdalena Karlikowska, Albel Singh, Apoorva Bhatt, Sascha Ott, Andrew R Bottrill, Gurdyal S Besra, Elizabeth Fullam, The Cell Surface, 7: 100052, 2021
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hPMC Wordle

"Characterization of highly proliferative decidual precursor cells during the window of implantation in human endometrium”, Maria Diniz-da-Costa, Chow-Seng Kong, Katherine J Fishwick, Thomas Rawlings, Paul J Brighton, Amelia Hawkes, Joshua Odendaal, Siobhan Quenby, Sascha Ott, Emma S Lucas, Pavle Vrljicak, Jan J Brosens, Stem Cells, 39: 1067-1080, 2021
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Cell-type paper wordle

“Regulation of Cell Type-Specific Immunity Networks in Arabidopsis Roots”, Charlotte Rich-Griffin, Ruth Eichmann, Marco U Reitz, Sophie Hermann, Kate Woolley-Allen, Paul E Brown, Kate Wiwatdirekkul, Eddi Esteban, Asher Pasha, Karl-Heinz Kogel, Nicholas J Provart, Sascha Ott, Patrick Schäfer, Plant Cell, 32: 2742-2762, 2020
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eMSC Wordle

“Impact of sustained TGFβ receptor inhibition on chromatin accessibility and gene expression in cultured human endometrial MSC”, Raffaella Lucciola, Pavle Vrljicak, Shanti Gurung, Caitlin Filby, Saeedeh Darzi, Joanne Muter, Sascha Ott, Jan Brosens, Caroline E Gargett, Frontiers Cell and Developmental Biology, 8:567610, 2020
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Wordle depiction of paper contents

“Recurrent pregnancy loss is associated with a pro-senescent decidual response during the peri-implantation window”, Emma S Lucas, Pavle Vrljicak, Joanne Muter, Maria M Diniz-da-Costa, Paul J Brighton, Chow-Seng Kong, Julia Lipecki, Katherine J Fishwick, Joshua Odendaal, Lauren J Ewington, Siobhan Quenby, Sascha Ott, Jan J Brosens, Communications Biology, 3: 37, 2020
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Wordle depiction of paper contents

"Single-cell transcriptomics - a high-resolution avenue for plant functional genomics”, Charlotte Rich-Griffin, Annika Stechemesser, Jessica Finch, Emma Lucas, Sascha Ott, Patrick Schäfer, Trends in Plant Science, 25: 186-197, 2020
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Wordle depiction of paper contents

“Non-Coding Mutations in Urothelial Bladder Cancer: Biological and Clinical Relevance and Potential Utility as Biomarkers”, Ruhana R Jeeta, Naheema S Gordon, Laura Baxter, Anshita Goel, Boris Noyvert, Sascha Ott, Rebecca H Boucher, Nada Humayun-Zakaria, Roland Arnold, Nicholas D James, Maurice P Zeegers, KK Cheng, Richard T Bryan, Douglas G Ward, Bladder Cancer, 5: 263-272, 2019
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Wordle 23-gene panel

“Targeted deep sequencing of urothelial bladder cancers and associated urinary DNA: a 23-gene panel with utility for non-invasive diagnosis and risk stratification”, Douglas G Ward, Naheema S Gordon, Rebecca H Boucher, Sarah J Pirrie, Laura Baxter, Sascha Ott, Lee Silcock, Celina M Whalley, Joanne D Stockton, Andrew D Beggs, Mike Griffiths, Ben Abbotts, Hanieh Ijakipour, Fathimath N Latheef, Robert A Robinson, Andrew J White, Nicholas D James, Maurice P Zeegers, KK Cheng, Richard T Bryan, BJU International, 124: 532-544, 2019
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Nodulation

“Regulation of resource partitioning coordinates nitrogen and rhizobia responses and autoregulation of nodulation in the legume Medicago truncatula”, Beatriz Lagunas, Mingkee Achom, Roxanna Bonyadi-Pour, Alonso J Pardal, Bethany L Richmond, Chrysi Sergaki, Saúl Vázquez, Patrick Schäfer, Sascha Ott, John Hammond, Miriam L Gifford, Molecular Plant, 12: 833-846, 2019
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