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Other Publications

Warwick researchers have also been involved in a large number of collaborative publications during the course of this pandemic, sharing our knowledge and skills with other researchers.

Here we detail publications where members of the Zeeman Institute were involved, but did not play a leading role.

Wang, L., Didelot, X., Yang, J., Wong, G., Shi, Y., Liu, W., Gao, G.F. and Bi, Y. (2020) "Inference of person-to-person transmission of COVID-19 reveals hidden super-spreading events during the early outbreak phase" Nature Communications 11 5006.
Fountain-Jones, N.M., Appaw, R.C., Carver, S., Didelot, X., Volz, E. and Charleston M. (2020) Emerging phylogenetic structure of the SARS-CoV-2 pandemic. Virus Evolution 6 veaa082
Danon, L., Brooks-Pollock, E., Bailey, M & Keeling M.J. (2021) "A spatial model of COVID-19 transmission in England and Wales: early spread, peak timing and the impact of seasonality" Trans. R. Soc. B. 376 (1829).
Brooks-Pollock, E., Read, J.M., House, T., Medley, G.F., Keeling, M.J. & Danon, L. (2021) "The population attributable fraction of cases due to gatherings and groups with relevance to COVID-19 mitigation strategies " Trans. R. Soc. B. 376 (1829).
Brooks-Pollock, E., Read, J.M., McClean, A.R., Keeling, M.J. & Danon, L. (2021) "Mapping social distancing measures to the reproduction number for COVID-19 " Trans. R. Soc. B. 376 (1829).
Thompson, R.N. et al. (2020) “Key questions for modelling COVID-19 exit strategiesProc. R. Soc. B. 287 (1932).
Funk, S. et al. (2020) " Short-term forecasts to inform the response to the Covid-19 epidemic in the UK" (medRxiv)
Julia R. Gog, Edward M. Hill, Leon Danon & Robin N. Thompson (2021) "Vaccine escape in a heterogeneous population: insights for SARS-CoV-2 from a simple model", Roy. Soc. Open Sci. 8(7).
R Sachak-Patwa, HM Byrne, L Dyson, RN Thompson. (2021) "The risk of SARS-CoV-2 outbreaks in low prevalence settings following the removal of travel restrictions", (medRxiv).
Cavallaro, M., Moiz H., Keeling, M.J. & McCarthy, N.D. (2021) "Contrasting factors associated with COVID-19-related ICU admission and death outcomes in hospitalised patients by means of Shapley values", PLoS Comp. Biol. 17(6): e1009121
WS Hart, PK Maini, RN Thompson. (2021) "High infectiousness immediately before COVID-19 symptom onset highlights the importance of continued contact tracing", eLife 10:e65534. doi: 10.7554/eLife.65534
Shoya Iwanami, Keisuke Ejima et. al. (2021) "Detection of significant antiviral drug effects on COVID-19 with reasonable sample sizes in randomized controlled trials: A modeling study", PLoS Med. 18(7): e1003660.
Kwang Su Kim, Keisuke Ejima et. al. (2021) "A quantitative model used to compare within-host SARS-CoV-2, MERS-CoV, and SARS-CoV dynamics provides insights into the pathogenesis and treatment", PLoS Biol. 19(3): e3001128.
Francesca A. Lovell-Read, Sebastian Funk, Uri Obolski, Christl A. Donnelly & Robin N. Thompson (2021) "Interventions targeting non-symptomatic cases can be important to prevent local outbreaks: SARS-CoV-2 as a case study", J. Roy. Soc. Interface 18(178).
L Wang, X Didelot, YH Bi & GF Gao (2021) "Assessing the extent of community spread caused by mink-derived SARS-CoV-2 variants", The Innovation 2(3).
Christopher Woods, Lester Hedges, Christopher Edsall, Ellen Brooks-Pollock, Christopher Parton-Fenton, Trevelyan J McKinley, Matt J Keeling & Leon Danon (2022) "MetaWards: A flexible metapopulation framework for modelling disease spread", The Journal of Open Source Software 2(3).
William S Hart, Sam Abbott, Akira Endo, Joel Hellewell, Elizabeth Miller, Nick J Andrews, Philip K Maini, Sebastian Funk & Robin N Thompson (2022) "Inference of the SARS-CoV-2 generation time using UK household data", eLife 11 e70767.
William S Hart, Elizabeth Miller, Nick J Andrews, Pauline Waight, Philip K Maini, Sebastian Funk & Robin N Thompson (2022) "Generation time of the alpha and delta SARS-CoV-2 variants: an epidemiological analysis", The Lancet Infectious Diseases .