Pre Prints

7. Asymmetric co-substrate usage at a metabolic branch point can drive overflow metabolism Robert West,Sonal, Tailise D.S.G. Rodrigues, Wenying Shou, Orkun S. Soyer Posted July 25, 2025 bioRxiv \| LinkLink opens in a new window Link opens in a new window
6. Ammonia leakage can underpin nitrogen-sharing among soil microbes Luke Richards, Patrick Schäfer, Orkun S Soyer Posted April 08, 2024 bioRxiv \| LinkLink opens in a new window
5. Emergence of synchronised growth oscillations in filamentous fungi Praneet Prakash, Xue Jiang, Luke Richards, Zoe Schofield, Patrick Schafer, Marco Polin, Orkun S. Soyer, Munehiro Asally Posted December 23, 2023; bioRxiv \| LinkLink opens in a new window
4. Niche formation and metabolic interactions result in stable diversity in a spatially structured cyanobacterial community Sarah J.N. Duxbury, Sebastien Raguideau, Kelsey Cremin, Jerko Rosko, Mary Coates, Kieran Randall, Jing Chen, Christopher Quince, Orkun S. Soyer Posted February 08, 2024; bioRxiv \| LinkLink opens in a new window
3. Novel microbial syntrophies identified by longitudinal metagenomics Sebastien Raguideau, Anna Trego, Fred Farrell, Gavin CollinsLink opens in a new window, Christopher Quince, Orkun S Soyer Posted July 05, 2021 \| bioRxiv linkLink opens in a new window
2. A low-cost DIY device for high resolution, continuous measurement of microbial growth dynamics. Kalesh Sasidharan, Andrea S Martinez-Vernon, Jing Chen, Tiantian Fu, Orkun Soyer Posted Sept 04, 2018 \| bioRxiv linkLink opens in a new window
1. Machine learning based prediction of functional capabilities in metagenomically assembled microbial genomes. Fred Farrell, Orkun S Soyer, Christopher Quince Posted April 25, 2018 \| bioRxiv linkLink opens in a new window