Pre Prints

6. ChemChaste: Simulating spatially inhomogenous biochemical reaction-diffusion systems for modelling cell-environment feedbacks Connah G. M. Johnson, Alexander G. Fletcher, Orkun S. Soyer Posted October 22, 2021 \| bioRxiv link
5. Thioflavin T indicates membrane potential in mammalian cells and can affect it in a blue light dependent manner Emily Skates, Hadrien Delattre, Zoe Schofield, Munehiro Asally, Orkun S. Soyer Posted October 22, 2021 \| bioRxiv link
4. Novel microbial syntrophies identified by longitudinal metagenomics Sebastien Raguideau, Anna Trego, Fred Farrell, Gavin Collins, Christopher Quince, Orkun S Soyer Posted July 05, 2021 \| bioRxiv link
3. Multi-site enzymes as a mechanism for bistability in reaction networks Clarmyra Hayes, Elisenda Feliu, Orkun S Soyer Posted May 07, 2021 \| bioRxiv link \| In print ACS Synthetic Biology January 2022
2. A low-cost DIY device for high resolution, continuous measurement of microbial growth dynamics. Kalesh Sasidharan, Andrea S Martinez-Vernon, Jing Chen, Tiantian Fu, Orkun Soyer Posted Sept 04, 2018 \| bioRxiv link
1. Machine learning based prediction of functional capabilities in metagenomically assembled microbial genomes. Fred Farrell, Orkun S Soyer, Christopher Quince Posted April 25, 2018 \| bioRxiv link