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Publications

2021

  • Briggs NS., Bruce KE., Naskar S., Winkler ME. & Roper DI. (2021) The Pneumococcal Divisome: Dynamic Control of Streptococcus pneumoniae Cell Division. Front. Microbiol, DOI: 10.3389/fmicb.2021.737396.
  • Stokes K, Peltrini R, Bracale U, Trombetta M, Pecchia L & Basoli F. (2021) Enhanced Medical and Community Face Masks with Antimicrobial Properties: A Systematic Review. Journal of Clinical Medicine, DOI:10.3390/jcm10184066.
  • Stokes K., Castaldo R., Franzese M., Salvatore M., Fico G., Pokvic LG., Badnjevic A. & Pecchia L. (2021)
    A machine learning model for supporting symptom-based referral and diagnosis of bronchitis and pneumonia in limited resource settings,
    Biocybernetics and Biomedical Engineering, DOI: 10.1016/j.bbe.2021.09.002.
  • Rawlings TM., Makwana K., Tryfonos M. & Lucas ES. (2021) Organoids to model the endometrium: implantation and beyond, Reproduction and Fertility, DOI: 10.1530/RAF-21-0023.
  • Rawlings TM., Makwana K., Taylor DM., Molè MA., Fishwick KJ., Tryfonos M., Odendaal J., Hawkes A., Zernicka-Goetz M., Hartshorne GM., Brosens JJ. & Lucas ES. (2021) Modelling the impact of decidual senescence on embryo implantation in human endometrial assembloids, eLife, DOI: 10.7554/eLife.69603.
  • Durand S., Callan-Sidat A., McKeown J., Li S., Kostova G., Hernandez-Fernaud JR., Alam MT., Millard A., Allouche D., Constantinidou C., Condon C., Denham EL. (2021) Identification of an RNA sponge that controls the RoxS riboregulator of central metabolism in Bacillus subtilis, Nucleic Acids Research, DOI: 10.1093/nar/gkab444.
  • Wood KM. & Smith CJ. (2021) Clathrin: the molecular shape shifter, Biochem J, DOI: 10.1042/BCJ20200740.
  • Figiel DM., Elsayed R. & Nelson AC. (2021) Investigating the molecular guts of endoderm formation using zebrafish, Briefings in Functional Genomics, DOI: 10.1093/bfgp/elab013.
  • Larocque G., Moore DJ., Sittewelle M., Kuey C. , Hetmanski JHR., La-Borde GJ., Wilson BJ., Clarke NI., Caswell PT. & Royle SJ. (2021) Intracellular nanovesicles mediate α5β1 integrin trafficking during cell migration. Journal of Cell Biology, DOI: 10.1083/jcb.202009028.
  • Jones R.A., Shropshire H., Zhao C., Murphy A., Lidbury I., Wei T., Scanlan DJ. & Chen Y. (2021) Phosphorus stress induces the synthesis of novel glycolipids in Pseudomonas aeruginosa that confer protection against a last-resort antibiotic. ISME J. DOI: 10.1038/s41396-021-01008-7.
  • da-Costa MD, Kong C-S, Fishwick KJ, Rawlings T, Brighton PJ, Hawkes A, Odendaal J, Quenby S, Ott S, Lucas ES, Vrljicak P & Brosens JJ (2021) Characterization of highly proliferative decidual precursor cells during the window of implantation in human endometrium Stem Cells. DOI: 10.1002/stem.3367.
  • Grobas I., Polin M. & Asally M. (2021) Swarming bacteria undergo localized dynamic phase transition to form stress-induced biofilms. eLife, DOI: 10.7554/eLife.62632.
  • Ababi M., Tridgett M., Osgerby A. & Jaramillo A. (2021) Scarless ssDNA Recombineering of Phage in the Lysogenic State. Methods in Molecular Biology. Accepted for Publication.
  • Tridgett M., Ababi M. & Jaramillo A. (2021) Lambda Red Recombineering of Bacteriophage in the Lysogenic State. Methods in Molecular Biology. Accepted for Publication.
  • Shropshire H., Jones RA., Aguilo‐Ferretjans MM., Scanlan DJ. & Chen Y. (2021), Proteomics insights into the Burkholderia cenocepacia phosphorus stress response. Environ Microbiol, DOI: 10.1111/1462-2920.15451.
  • Stephenson E., Usselmann L., Tergongkar V., Virshup DV. & Dallmann R. (2021). Cancer clocks in tumourigenesis: The p53 pathway and beyond. Endocrine Related Cancer, DOI: 10.1530/ERC-20-0475.
  • Furze CM, Delso I., Casal E., Guy CS., Seddon C., Brown CM., Parker HL., Radhakrishnan A., Pacheco-Gomez P., Stansfeld PJ., Angulo J., Cameron AD. & Fullam E. (2021) Structural basis of trehalose recognition by the mycobacterial LpqY-SugABC transporter. J Biol Chem, DOI: 10.1016/j.jbc.2021.100307.

2020

  • Tridgett M., Ababi M., Osgerby A., Ramirez Garcia R. & Jaramillo A. (2020) Engineering Bacteria to Produce Pure Phage-like Particles for Gene Delivery ACS Synthetic Biology, DOI: 10.1021/acssynbio.0c00467.
  • Grobas I., Bazzoli DG. & Asally M. (2020) Biofilm and swarming emergent behaviours controlled through the aid of biophysical understanding and tools. Biochem Soc Trans, DOI: 10.1042/BST20200972.
  • Kumar SA., Needham RJ., Abraham K., Bridgewater HE., Garbutt LA., Xandri-Monje H., Dallmann R., Perrier S., Sadler PJ. & Lévi F. (2020) Dose and time-dependent tolerability and efficacy of organo-osmium complex FY26 and its tissue pharmacokinetics in hepatocarcinoma-bearing mice. Metallomics, DOI 10.1093/mtomcs/mfaa003.
  • Baker AN., Richards S-J., Guy CS., Congdon TR., Hasan M., Zwetsloot AJ., Gallo A., Lewandowski JR., Stansfeld PJ., Straube A., Walker M., Chessa S., Pergolizzi G., Dedola S., Field RA. & Gibson MI. (2020) The SARS-COV-2 Spike Protein Binds Sialic Acids and Enables Rapid Detection in a Lateral Flow Point of Care Diagnostic Device. ACS Cent Sci, DOI: 10.1021/acscentsci.0c00855.
  • Yang J., Song JI., Song Q., Rho JY., Mansfield EDH., Hall SCL., Sambrook M., Huang F. & Perrier S. (2020). Hierarchical Self-Assembled Photo-Responsive Tubisomes from a Cyclic Peptide-Bridged Amphiphilic Block Copolymer. Angewandte Chemie - Int Ed, 10.1002/anie.201916111
  • Chew YM. & Cross RA. (2021) Molecular Motors: Kif14’s Disordered Dongle. Current Biology, DOI: 10.1016/j.cub.2020.06.095.
  • Cook J., Baverstock TC., McAndrew MBL, Stansfeld PJ., Roper DI. & Crow A. (2020) Insights into bacterial cell division from a structure of EnvC bound to the FtsX periplasmic domain. PNAS, DOI: 10.1073/pnas.2017134117.
  • Anonye BO., Nweke V., Furner-Pardoe J., Gabrilska R., Rafiq A., Ukachukwu F., Bruce J., Lee C., Unnikrishnan M., Rumbaugh KP., Snyder LS. & Harrison F. (2020) The safety profile of Bald’s eyesalve for the treatment of bacterial infections. Sci Rep, 10:17513, DOI: 10.1038/s41598-020-74242-2.
  • Leech R. & Sampath K. (2020) A CRISPR cut for messenger RNAs. Lab Animal, DOI: 10.1038/s41684-020-00661-3.
  • van de Wiel J., Meigh L., Bhandare A., Cook J., Nijjar S., Huckstepp R. & Dale N. (2020) Connexin26 mediates CO2-dependent regulation of breathing via glial cells of the medulla oblongata. Commun Biol, 3:521, DOI: 10.1038/s42003-020-01248-x.
  • Tchoupa AK., Watkins KE., Jones RA., Kuroki A., Alam MT., Perrier S., Chen Y. & Unnikrishnan M. (2020) The type VII secretion system protects Staphylococcus aureus against antimicrobial host fatty acids. Sci Rep, 10:14838, DOI: 10.1038/s41598-020-71653-z.
  • Watkins KE. & Unnikrishnan M. (2020) Chapter Three - Evasion of host defenses by intracellular Staphylococcus aureus. Advances in Applied Microbiology, 112:105-141. DOI: 10.1016/bs.aambs.2020.05.001.
  • Furner-Pardoe J., Anonye BO., Cain R., Moat J., Ortori CA., Lee C., Barrett DA., Corre C. & Harrison F. (2020) Anti-biofilm efficacy of a medieval treatment for bacterial infection requires the combination of multiple ingredients. Sci Rep 10:12687. DOI: 10.1038/s41598-020-69273-8.
  • Dospinescu V-M., Tiele A. & Covington JA. (2020) Sniffing Out Urinary Tract Infection—Diagnosis Based on Volatile Organic Compounds and Smell Profile. Biosensors, 10:83. DOI: 10.3390/bios10080083.
  • Roscioli E., Germanova T.E., Smith C.A., Embacher P.A., Erent M., Thompson A.I., Burroughs N.J. & McAinsh A.D. (2020) Ensemble-level organization of human kinetochores and evidence for distinct tension and attachment sensors. Cell Reports, 31:107535. DOI: 10.1016/j.celrep.2020.107535 .
  • Stokes K., Winczura A., Song B., De Piccoli D. & Grabarczyk DB. (2020) Ctf18-RFC and DNA Pol ϵ form a stable leading strand polymerase/clamp loader complex required for normal and perturbed DNA replication. Nucleic Acids Research, 48: 8128–8145, DOI: 10.1093/nar/gkaa541.
  • Dunford JR., Blanks AM. & Gallos G. (2020) Calcium activated chloride channels and their role in the myometrium. Current Opinion in Physiology 13:43-48, DOI: 10.1016/j.cophys.2019.09.010.
  • Catherwood AJ., Lloyd AJ., Tod JA., Chauhan S., Slade SE., Walkowiak G., Galley NF., Punekar A., Smart K., Rea D., Evans ND., Chappell MJ., Roper DI. & Dowson CG. (2020) Substrate and stereochemical control of peptidoglycan crosslinking by transpeptidation by Escherichia coli PBP1B. JACS, DOI: 10.1021/jacs.9b08822.
  • Charmet J., Rodrigues R., Yildirim E., Challa PK., Roberts B., Dallmann R. & Whulanza Y. (2020) Low-Cost Microfabrication Tool Box. Micromachines, DOI: 10.3390/mi11020135.DOI: 10.1016/j.cophys.2019.09.010
  • Benarroch JM. & Asally M. (2020) The Microbiologist’s Guide to Membrane Potential Dynamics. Trends in Microbiology, DOI: 10.1016/j.tim.2019.12.008.

2019

  • Dospinescu VM, Nijjar S., Spanos F., Cook J., de Wolf E., Biscotti MA., Gerdol M. & Dale N. (2019) Structural determinants of CO2-sensitivity in the β connexin family suggested by evolutionary analysis. Commun Biol DOI: 10.1038/s4210.1038/s42003-019-0576-2.
  • Vlisidou I., Hapeshi A., Healey JRJ., Smart K., Yang G. & Waterfield N. (2019) The Photorhabdus asymbiotica virulence cassettes deliver protein effectors directly into target eukaryotic cells, eLife, DOI: 10.7554/eLife.46259
  • Clark, R., Usselmann L., Brown MR., Goeppert AU. & Corrigan A. (2019) A flexible high content imaging assay for profiling macrophage efferocytosis. J Immunol Methods, DOI: 10.1016/j.jim.2019.112636.
  • Morris KL., Jones JR., Halebian M., Wu S., Baker M., Armache J-P., Ibarra AA., Sessions RB., Cameron AD., Cheng Y. & Smith CJ. (2019) Cryo-EM of multiple cage architectures reveals a universal mode of clathrin self-assembly. Nature Structural & Molecular Biology, DOI: 10.1038/s41594-019-0292-0.
  • Stubbs C., Congdon T., Davis J., Lester D., Richards S.J. & Gibson MI. (2019) High-Throughput Tertiary Amine Deoxygenated Photopolymerizations for Synthesizing Polymer Libraries. Macromolecules, DOI: 10.1021/acs.macromol.9b01714.
  • Fenn JS., Nepravishta R., Guy CS., Harrison J., Angulo J., Cameron AD. & Fullam E. (2019) Structural Basis of Glyceroplosphodiester Recognition by the Myobacterium tuberculosis Substrate-Binding Protein UgpB. ACS Chemical Biology, DOI: 10.1021/acschembio.9b00204.
  • Dunford JR., Lutton EJ., Atia J., Blanks AM. & van den Berg HA. (2019) Computational physiology of uterine smooth muscle. Science Progress, DOI: 10.1177/0036850419850431.
  • Currin A., Kwok J., Sadler JC., Bell EL., Swainston N., Ababi M., Day P., Turner NJ. & Kell DB., (2019) GeneORator: An Effective Strategy for Navigating Protein Sequence Space More Efficiently through Boolean OR-Type DNA Libraries. ACS Synthetic Biology, DOI: 10.1021/acssynbio.9b00063
  • Siddiqui N.*, Zwetsloot AJ.*, Bachmann A., Roth D., Hussain H., Brandt J., Kaverina I. & Straube A. (2019) PTPN21 and Hook3 relieve KIF1C autoinhibition and activate intracellular transport. Nature Communications, DOI:10.1038/s41467-019-10644-9. (* contributed equally)

  • Pardal AJ., Fernandes-Duarte F. & Bowman AJ. (2019) The histone chaperoning pathway: from ribosome to nucleosome. Essays in Biochemistry, DOI: 10.1042/EBC20180055.
  • Richardson SA., Rawlings TM., Muter J., Walker M., Brosens JJ., Cameron NR. & Eissa AM. (2019) Covalent Attachment of Fibronectin onto Emulsion-Templated Porous Polymer Scaffolds Enhances Human Endometrial Stromal Cell Adhesion, Infiltration, and Function. Macromolecular Bioscience, DOI: 10.1002/mabi.201800351.
  • Sirec T., Benarroch JM., Buffard P., Garcia-Ojalvo J. & Asally M. (2019) Electrical polarization enables integrative quality control during bacterial differentiation into spores. iScience, DOI: 10.1016/j.isci.2019.05.044.
  • Hapeshi A., Benarroch JM., Clarke DJ. & Waterfield NR. (2019) Iso-propyl stilbene: a life cycle signal? Microbiology, 165: 516-526, DOI: 10.1099/mic.0.000790.

2018

  • Chen F., Moat J., McFeely D., Clarkson G., Hands-Portman IJ., Furner-Pardoe JF., Harrison F., Dowson CG. & Sadler PJ. (2018) Biguanide Iridium(III) Complexes with Potent Antimicrobial Activity. J. Med. Chem. DOI: 10.1021/acs.jmedchem.8b00906.

  • Zwetsloot AJ., Tut G. & Straube A. (2018) Measuring microtubule dynamics, Essays in Biochemistry, DOI: 10.1042/EBC20180035.
  • Pesenti ME., Prumbaum D., Auckland P., Smith CM., Faesen AC., Petrovic A., Erent M., Maffini S., Pentakota S., Weir JR., Lin YC., Raunser S., McAinsh AD. & Musacchio A. (2018) Reconstitution of a 26-Subunit Human Kinetochore Reveals Cooperative Microtubule Binding by CENP-OPQUR and NDC80. Molecular Cell, 71: 923-939.e10, DOI: 10.1016/j.molcel.2018.07.038.
  • Bridge LJ., Mead J., Frattini E., Winfield I., Ladds G. (2018) Modelling and simulation of biased agonism dynamics at a G protein-coupled receptor. J Theor Biol. 442:44-65, DOI: 10.1016/j.jtbi.2018.01.010.
  • Meadows JC., Messin LJ., Kamnev A., Lancaster TC, Balasubramanian MK., Cross RA. & Millar, JBA. (2018). Opposing kinesin complexes queue at plus tips to ensure microtubule catastrophe at cell ends. EMBO Reports, 19:e46196, DOI: 10.15252/embr.201846196.

2017

  • Halebian M., Morris K. & Smith C. (2017) Structure and Assembly of Clathrin Cages. Subcell Biochem, 83:551-567, DOI: 10.1007/978-3-319-46503-6_20.
  • Smith S.M., Baker M., Halebian M. & Smith CJ. (2017) Weak Molecular Interactions in Clathrin-Mediated Endocytosis. Front Mol Biosci, DOI: 10.3389/fmolb.2017.00072.
  • Wood L., Larocque G., Clarke NI., Sarkar S. & Royle SJ. (2017) New tools for “hot-wiring” clathrin-mediated endocytosis with temporal and spatial precision. Journal of Cell Biology, DOI: 10.1083/jcb.201702188.
  • Auckland P., Clarke NI., Royle SJ. & McAinsh AD. (2017) Congressing kinetochores progressively load Ska complexes to prevent force-dependent detachment. Journal of Cell Biology, DOI: 10.1083/jcb.201607096.
  • Meadows JC., Lancaster TC., Buttrick GJ., Sochaj AM., Mora Santos M., Messin L., Mora Santos MdM., Hardwick KG. & Millar JB. (2017), Identification of a Sgo2-dependent but Mad2-independent pathway controlling anaphase onset in fission yeast. Cell Reports, 18:1422-1433. DOI: 10.1016/j.celrep.2017.01.032.

2016

  • Wood LA. & Royle SJ. (2018) Imaging “Hot-Wired” Clathrin-Mediated Endocytosis. In: Swan L. (eds) Clathrin-Mediated Endocytosis. Methods in Molecular Biology, vol 1847, Humana PressNew York, NY. DOI:10.1007/978-1-4939-8719-1_7.

  • de Wolf E., van de Wiel J., Cook J. & Dale N. (2016) Altered CO2 sensitivity of connexin26 mutant hemichannels in vitro. Physiol Rep, 4:e13038, DOI: 10.14814/phy2.13038.
  • Weston C., Winfield I., Harris M., Hodgson R., Shah A., Dowell SJ., Mobarec JC., Woodcock DA., Reynolds CA., Poyner D.R., Watkins HA. & Ladds G. (2016) Receptor activity modifying protein-directed G protein signaling specificity for the calcitonin gene-related peptide family of receptors. Journal of Biological Chemistry, DOI: 10.1074/jbc.M116.751362.
  • Knight A., Hemmings JL., Winfield I., Leuenberger M., Frattini E., Frenguelli BG., Dowell SJ., Lochner M. & Ladds G. (2016) Discovery of Novel Adenosine Receptor Agonists that Exhibit Subtype Selectivity. Journal of Medicinal Chemistry. 59, 947-964, DOI: 10.1021/acs.jmedchem.5b01402.

2015

  • Auckland P. & McAinsh AD. (2015) Building an integrated model of chromosome congression. Journal of Cell Science, 128, 3363-74. DOI:10.1242/jcs.169367.
  • Wood LA. & Royle SJ. (2015) Zero Tolerance: Amphipathic Helices in Endocytosis Developmental Cell, 33, 119-20. DOI:10.1016/j.devcel.2015.04.007.
  • Bancroft J., Auckland P., Samora CP. & McAinsh AD. (2015) Chromosome congression is promoted by CENP-Q- and CENP-E-dependent pathways. Journal of Cell Science, 128, 171-184. DOI: 10.1242/jcs.163659.