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Multiple Testing Inference

  • Nichols, T. (2012). Multiple testing corrections, nonparametric methods, and random field theory. NeuroImage. doi:10.1016/j.neuroimage.2012.04.014
  • Ge, T., Feng, J., Hibar, D. P., Thompson, P. M., & Nichols, T. E. (2012). Increasing Power for Voxel-wise Genome-wide Association Studies: The Random Field Theory, Least Square Kernel Machines and Fast Permutation Procedures. NeuroImage, 63(2), 858–873. doi:10.1016/j.neuroimage.2012.07.012
  • Poldrack, R. A., Mumford, J. A., & Nichols, T. E. (2011). Handbook of fMRI Data Analysis (p. 450). Cambridge University Press.
  • Salimi-Khorshidi, G., Smith, S. M., & Nichols, T. E. (2010). Adjusting the effect of nonstationarity in cluster-based and TFCE inference. NeuroImage, 54(3), 2006–2019. doi:10.1016/j.neuroimage.2010.09.088
  • Kriegeskorte, N., Lindquist, M. a, Nichols, T. E., Poldrack, R. A., & Vul, E. (2010). Everything you never wanted to know about circular analysis, but were afraid to ask. Journal of cerebral blood flow and metabolism, 30(9), 1551–7. doi:10.1038/jcbfm.2010.86
  • Silver, M., Montana, G., & Nichols, T. E. (2010). False positives in neuroimaging genetics using voxel-based morphometry data. NeuroImage, 54(2), 992–1000. doi:10.1016/j.neuroimage.2010.08.049
  • Smith, S. M., & Nichols, T. E. (2009). Threshold-free cluster enhancement: Addressing problems of smoothing , threshold dependence and localisation in cluster inference. NeuroImage, 44(1), 83–98. doi:10.1016/j.neuroimage.2008.03.061
  • Nichols, T. E., & Poline, J.-B. (2009). Commentary on Vul et al.’s (2009) “Puzzlingly High Correlations in fMRI Studies of Emotion, Personality, and Social Cognition.” Perspectives on Psychological Science, 4(3), 291–293. doi:10.1111/j.1745-6924.2009.01126.x
  • Zhang, H., Nichols, T. E., & Johnson, T. D. (2009). Cluster mass inference via random field theory. Neuroimage, 44(1), 51–61. doi:10.1016/j.neuroimage.2008.08.017
  • Nichols, T. E., Brett, M., Andersson, J., Wager, T. D., & Poline, J.-B. (2005). Valid conjunction inference with the minimum statistic. Neuroimage, 25(3), 653–660. doi:10.1016/j.neuroimage.2004.12.005
  • Pantazis, D., Nichols, T. E., Baillet, S., & Leahy, R. M. (2005). A comparison of random field theory and permutation methods for the statistical analysis of MEG data. NeuroImage, 25, 383 – 394. doi:10.1016/j.neuroimage.2004.09.040
  • Hayasaka, S., & Nichols, T. E. (2004). Combining voxel intensity and cluster extent with permutation test framework. Neuroimage, 23(1), 54–63. doi:10.1016/j.neuroimage.2004.04.035
  • Hayasaka, S., Phan, K. L., Liberzon, I., Worsley, K. J., & Nichols, T. E. (2004). Nonstationary cluster-size inference with random field and permutation methods. NeuroImage, 22(2), 676 – 687. doi:10.1016/j.neuroimage.2004.01.041
  • Nichols, T. E., & Hayasaka, S. (2003). Controlling the familywise error rate in functional neuroimaging: a comparative review. Statistical Methods in Medical Research, 12(5), 419–446.doi:10.1191/0962280203sm341ra
  • Hayasaka, S., & Nichols, T. E. (2003). Validating cluster size inference: random field and permutation methods. NeuroImage, 20, 2343–2356. doi:10.1016/j.neuroimage.2003.08.003
  • Genovese, C. R., Lazar, N. A., & Nichols, T. E. (2002). Thresholding of Statistical Maps in Functional Neuroimaging Using the False Discovery Rate. NeuroImage, 15(4), 870–878. doi:10.1006/nimg.2001.1037
  • Nichols, T. E., & Holmes, A. P. (2001). Nonparametric permutation tests for functional neuroimaging: A primer with examples. Human Brain Mapping, 15(1), 1–25. doi:10.1002/hbm.1058
  • Petersson, K. M., Nichols, T. E., Poline, J.-B., & Holmes, A. P. (1999). Statistical limitations in functional neuroimaging II. Signal detection and statistical inference. Philosophical Transactions of the Royal Society B: Biological Sciences, 354(354), 1261–1281. doi:10.1098/rstb.1999.0478
  • Holmes, A. P., Watson, J. D. G., & Nichols, T. E. (1998). Holmes and Watson on “Sherlock.” Journal of Cerebral Blood Flow & Metabolism, 18(6), 697–698.doi:10.1097/00004647-199806000-00012



Contact Info

Room D0.03
Deptment of Statistics
University of Warwick
United Kingdom

Tel: +44(0)24 761 51086
Email: t.e.nichols 'at'
Blog: Neuroimaging Tips & Tricks

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Handbook of fMRI Data Analysis by Russ Poldrack, Thomas Nichols and Jeanette Mumford