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CellMet: Extracting 3D shape and topology metrics from confluent cells within tissues
A new paper from the Saunders lab introduces CellMet, an open-source toolkit that extracts 3D cell shape and topology metrics within dense tissue. Going beyond basic measures like volume and surface area, CellMet reveal detailed morphological features - such as twisting shape - and highlights how cells interact and organise themselves. From organoids to Drosophila embryos, CellMet provides a powerful framework to reveal hidden tissue architecture.
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