I have explored a wide spectrum of scientific projects and have long and ongoing research interests in four broad but interlinked research fields.
- Molecular Virology-Viral gene expression and function, viral RNA/DNA replication and virus-host (plants and fungi) interactions.
- RNA Signaling-Roles of RNA molecules in signal transduction associated with flowering and RNA silencing-mediated plant immunity against viral, bacterial and fungal pathogens and insects.
- Plant Epigenetics-Epigenetic modulation in tomato (leaf, fruit and seed) development and response to abiotic stresses.
- Virus-based Technology for Plant Functional Omics, and Novel Strategies for Crop Improvement.
Over years, I have been interested in engineering plant antiviral resistance such as development of an inducible suicidal strategy to protect plants from virus infection. These works have led to uncover the first RNA silencing suppressor encoded by DNA viruses, and to create a transDNA system to study viral DNA replication and virus-plant interactions. We also reported the first RNA silencing suppressor encoded by fungal viruses and sequenced genomes of multiple fungal mitochondrial viruses and established a new fungal virus genus Mitovirus. We proposed the concept of virus gateway and survival of plant innate silencing defence, and developed an in planta RNA mobility assay to investigate RNA signaling in flowering and in intercellular and systemic RNA silencing. We developed virus-induced flowering systems for floral induction and later extended this technology to dissect gene functions related to flowering time, seed yields and other traits in dicot and monocot crops including wheat and millet. We developed VIGS systems to investigate gene function and roles of DNA methylation and demethylation as well as microRNAs in tomato development and fruit ripening. tomato seed vivipary, and somatic inheritance of a tomato epimutation. More recently, we demonstrated active involvement of epigenetic modulators and microRNAs in tomato response to abiotic stresses. We also developed a virus-induced gene editing system in plants. These works have led to numerous scientific publications:
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I obtained a BSc in Microbiology in 1984, an MSc in Microbial Genetics in 1987 and a PhD in Plant Virology in 1990.
I am an elected Fellow of the Royal Society of Biology. I serve as Member for the UKRI International Development Peer Review College, Member of the UKRI Future Leaders Fellowships (FLF) Panel College, and Member of the UKRI FLF Sift and Interview Panels. I am a Mentor for the UKRI FLF Leadership Mentoring Programme. I also serve as Editor or Editorial Board Member for several international journals.
- 'Mohamed, Atef M., 'Jin, Zhenhui, 'Osman, Toba, 'Shi, Nongnong, 'T?r, Mahmut, 'Jackson, Stephen D., 'Hong, Yiguo, 2022. 'Hotspot siRNA confers plant resistance against viral infection. Biology, 11 (5)
- Zhang, Xian, Kang, Lihua, Zhang, Qi, Meng, Qiqi, Pan, Yafei, Yu, Zhiming, Shi, Nongnong, Jackson, Stephen D., Zhang, Xinlian, Wang, Huizhong, Tör, Mahmut, Hong, Yiguo, 2020. An RNAi suppressor activates in planta virus-mediated gene editing. Functional & Integrative Genomics, 20, pp. 471-477
- Chen, Weiwei, Zhang, Xian, Fan, Yaya, Li, Bin, Ryabov, Eugene, Shi, Nongnong, Zhao, Mei, Yu, Zhiming, Qin, Cheng, Zheng, Qianqian, Zhang, Pengcheng, Wang, Huizhong, Jackson, Stephen D., Cheng, Qi, Liu, Yule, Gallusci, Philippe, Hong, Yiguo, 2018. A genetic network for systemic RNA silencing in plants. Plant Physiology, 176 (4), pp. 2700-2719
- Yu, Zhiming, Chen, Qiyuan, Chen, Weiwei, Zhang, Xian, Mei, Fengling, Zhang, Pengcheng, Zhao, Mei, Wang, Xiaohong, Shi, Nongnong, Jackson, Stephen D., Hong, Yiguo, 2018. Multigene editing via CRISPR/Cas9 guided by a single-sgRNA seed in Arabidopsis. Journal of Integrative Plant Biology, 60 (5), pp. 376-381
- Taylor, Jemma L., Massiah, Andrea J., Kennedy, Sue, Hong, Yiguo, Jackson, Stephen D., 2017. FLC expression is down-regulated by cold treatment in Diplotaxis tenuifolia (wild rocket), but flowering time is unaffected. Journal of Plant Physiology, 214, pp. 7-15
- Chen, Weiwei, Kong, Junhua, Lai, Tongfei, Manning, Kenneth, Wu, Chaoqun, Wang, Ying, Qin, Cheng, Li, Bin, Yu, Zhiming, Zhang, Xian, He, Meiling, Zhang, Pengcheng, Gu, Mei, Yang, Xin, Mahammed, Atef, Li, Chunyang, Osman, Toba, Shi, Nongnong, Wang, Huizhong, Jackson, Stephen D. et al (Select to open full list), 2015. Tuning LeSPL-CNR expression by SlymiR157 affects tomato fruit ripening. Scientific Reports, 5, pp. 1-6
- Chen, Weiwei, Kong, Junhua, Qin, Cheng, Yu, Sheng, Tan, Jinjuan, Chen, Yun-ru, Wu, Chaoqun, Wang, Hui, Shi, Yan, Li, Chunyang, Li, Bin, Zhang, Pengcheng, Wang, Ying, Lai, Tongfei, Yu, Zhiming, Zhang, Xian, Shi, Nongnong, Wang, Huizhong, Osman, Toba, Liu, Yule et al (Select to open full list), 2015. Requirement of CHROMOMETHYLASE3 for somatic inheritance of the spontaneous tomato epimutation Colourless non-ripening. Scientific Reports, 5, pp. 1-7
- Hong, Yiguo, Jackson, Stephen D., 2015. Floral induction and flower formation : the role and potential applications of miRNAs. Plant Biotechnology Journal, 13 (3), pp. 282-292
- Li, Bin, Hu, Feng, Zhang, Qi, Zhang, Xian, Hong, Yiguo, 2014. A cellular gene as a double surveillance agent for plant to combat pathogen. Plant Signaling & Behavior, 9 (1)
- Kong, Jinhua, Chen, Weiwei, Shen, Jiajia, Qin, Cheng, Lai, Tongfei, Zhang, Pengcheng, Wang, Ying, Wu, Chaoqun, Yang, Xin, Hong, Yiguo, 2013. Virus-induced gene complementation in tomato. Plant Signaling & Behavior, 8 (11)
- Qin, Cheng, Shi, Nongnong, Gu, Mei, Zhang, Hang, Li, Bin, Shen, Jiajia, Mohammed, Atef, Ryabov, Eugene V., Li, Chunyang, Wang, Huizhong, Liu, Yule, Osman, Toba, Vatish, Manu, Hong, Yiguo, 2012. Involvement of RDR6 in short-range intercellular RNA silencing in Nicotiana benthamiana. Scientific Reports, Vol.2 (No.467)
- Zhou, Tao, Zhang, Hang, Lai, Tongfei, Qin, Cheng, Shi, Nongnong, Wang, Huizhong, Jin, Mingfei, Zhong, Silin, Fan, Zaifeng, Liu, Yule, Wu, Zirong, Jackson, Stephen D., Giovannoni, James J., Rolin, Dominique, Gallusci, Philippe, Hong, Yiguo, 2012. Virus-induced gene complementation reveals a transcription factor network in modulation of tomato fruit ripening. Scientific Reports, Vol.2
- Jackson, Stephen D., Hong, Yiguo, 2012. Systemic movement of FT mRNA and a possible role in floral induction. Frontiers in Plant Science, Vol.3
- Shi, Yan, Qin, Yanhong, Cao, Yanyong, Sun, Hu, Zhou, Tao, Hong, Yiguo, Fan, Zaifeng, 2011. Influence of an m-type thioredoxin in maize on potyviral infection. European Journal of Plant Pathology, Vol.131 (No.2), pp. 317-326
- Shi, N. N., Xu, Y., Yang, K. F., Chen, Y., Wang, H. Z., Xu, X. B., Hong, Yiguo, 2011. Development of a sensitive diagnostic assay to detect Cymbidium mosaic virus and Odontoglossum ringspot virus in members of the Orchidaceae. Journal of Horticultural Science and Biotechnology, Vol.86 (No.1), pp. 69-73
- Wu, Ye-Lin, Huang, Jing, Liu, Jian, Jin, Ming-Fei, Gu, Mei, Hong, Yiguo, Wu, Zi-Rong, 2011. Protective effect of recombinant human glucagon-like peptide-1 (rhGLP-1) pretreatment in STZ-induced diabetic mice. Journal of Peptide Science, Vol.17 (No.7), pp. 499-504
- Li, Chunyang, Gu, Mei, Shi, Nongnong, Zhang, Hang, Yang, Xin, Osman, Toba, Liu, Yule, Wang, Huizhong, Vatish, Manu, Jackson, Stephen D., Hong, Yiguo, 2011. Mobile FT mRNA contributes to the systemic florigen signalling in floral induction. Scientific Reports, Vol.1 (No.73), pp. 1-7
- Tang, Yang, Wang, Fei, Zhao, Jinping, Xie, Ke, Hong, Yiguo, Liu, Yule, 2010. Virus-based microRNA expression for gene functional analysis in plants. Plant Physiology, Vol.153 (No.2), pp. 632-641
- Li, Chunyang, Zhang, Kefeng, Zeng, X. W., Jackson, Stephen D., Zhou, Yu, Hong, Yiguo, 2009. A cis element within Flowering Locus T mRNA determines its mobility and facilitates trafficking of heterologous viral RNA. Journal of Virology, Vol.83 (No.8), pp. 3540-3548
- Zhou, Yu, Ryabov, Eugene V., Zhang, Xuemei, Hong, Yiguo, 2008. Influence of viral genes on the cell-to-cell spread of RNAsilencing. Journal of Experimental Botany, Vol.59 (No.10), pp. 2803-2813
- Lin, Zhefeng, Hong, Yiguo, Yin, Mingan, Li, Chunyang, Zhang, Kefeng, Grierson, Donald, 2008. A tomato HD-Zip homeobox protein, LeHB-1, plays an important role in floral organogenesis and ripening. Plant Journal, 55 (2), pp. 301-310
- Jin, Mingfei, Li, Chunyang, Shi, Yan, Ryabov, Eugene V., Huang, Jing, Wu, Zirong, Fan, Zaifeng, Hong, Yiguo, 2008. A single amino acid change in a geminiviral Rep protein differentiates between triggering a plant defence response and initiating viral DNA replication. Journal of General Virology, Vol.89 (Part 10), pp. 2636-2641
- Chen, Zhaorong, Zhou, Tao, Wu, Xuehong, Hong, Yiguo, Fan, Zaifeng, Li, Huaifang, 2008. Influence of cytoplasmic heat shock protein 70 on viral infection of Nicotiana benthamiana. Molecular Plant Pathology, 9 (6), pp. 809-817
- Ma, Yunxia, Zhou, Tao, Hong, Yiguo, Fan, Zaifeng, Li, Huaifang, 2008. Decreased level of ferredoxin I in Tobacco mosaic virus-infected tobacco is associated with development of the mosaic symptom. Physiological and Molecular Plant Pathology, Vol.72 (No.1-3), pp. 39-45
- Zeng, X. W., Zhang, Kefeng, Li, C. Y., Zhou, Yu, Bo, L., Zhang, X. M., Hong, Yiguo, 2008. Expression of highly immunogenic tuberculosis proteins in plants using a versatile Potato virus X-based expression system. Journal of Horticultural Science and Biotechnology, Vol.83 (No.1), pp. 4-8
- Segers, Gerrit C., van Wezel, Rene, Zhang, Xuemei, Hong, Yiguo, Nuss, Donald L., 2006. Hypovirus papain-like protease p29 suppresses RNA silencing in the natural fungal host and in a heterologous plant system. Eukaryotic Cell, Vol.5 (No.6), pp. 896-904
- Manning, Kenneth, Tör, Mahmut, Poole, Mervin, Hong, Yiguo, Thompson, Andrew J., King , Graham J., Giovannoni, James J., Seymour, G. B. (Graham B.), 2006. A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening. Nature, Vol.38 (No.8), pp. 948-952
- Zhang, Xian, Lai, Tongfei, Zhang, Pengcheng, Zhang, Xinlian, Yuan, Chen, Jin, Zhenhui, Li, Hongmei, Yu, Zhiming, Qin, Cheng, Tör, Mahmut, Ma, Ping, Cheng, Qi, Hong, Yiguo, 2019. Mini review: Revisiting mobile RNA silencing in plants. Plant Science, Elsevier Ireland Ltd, pp. 113-117
- Bruce, Gareth, Gu, Mei, Shi, Nongnong, Liu, Yule, Hong, Yiguo, 2011. Influence of retinoblastoma-related gene silencing on the initiation of DNA replication by African cassava mosaic virus Rep in cells of mature leaves in Nicotiana benthamiana plants. Virology Journal, Bio Med Central
- Shi, Yan, Gu, Mei, Fan, Zaifeng, Hong, Yiguo, 2008. RNA silencing suppressors : how viruses fight back. Future Virology, Future Medicine Ltd, pp. 125-133
Title | Funder | Award start | Award end |
---|---|---|---|
Unravelling the impact of the mite varroa destructor on the interaction between the honeybee and its viruses | BBSRC | 01 Jan 2011 | 31 Dec 2013 |
UK-China Scholarships for Excellence - Mr Zhou Tao | China Scholarship Council | 01 Mar 2010 | 28 Feb 2011 |
Molecular Dissection of the SPB Protein in Cell-fate Determination and Fruit Development | Royal Society | 01 Sep 2007 | 31 Aug 2008 |
Targeting SiRNA hotspot - a novel strategy for controlling tomato viral disease | Royal Society | 02 Jan 2008 | 01 Apr 2008 |
International Incoming Fellowships - China fellowships | Royal Society | 05 Jan 2007 | 04 Jan 2008 |
Production of vaccines and pharmaceutical proteins in plants. | Chengdu Institute of Biological Products | 04 Jan 2005 | 03 Jan 2008 |