Adams, Sally and Pires da Silva, André (2024) Non-Mendelian transmission of X chromosomes : mechanisms and impact on sex ratios and population dynamics in different breeding systems. Biochemical Society Transactions, 52 (4). pp. 1777-1784. doi:10.1042/BST20231411 ISSN 0300-5127.
Al-Yazeedi, Talal, Adams, Sally, Tandonnet, Sophie, Turner, Anisa, Kim, Jun, Lee, Junho and Pires-daSilva, Andre (2024) The contribution of an X chromosome QTL to non-Mendelian inheritance and unequal chromosomal segregation in A. freiburgense. Genetics, 227 (1). iyae032. doi:10.1093/genetics/iyae032 ISSN 0016-6731.
Sirakawin, Chaweewan, Lin, Dongfa, Zhou, Ziyue, Xiaoxin, Wang, Kelleher, Rhianne, Huang, Shangyuan, Long, Weimiao, Pires-da Silva, André Francisco, Liu, Yu, Wang, Jingjing and Vinnikov, Ilya A. (2024) SKN-1/NRF2 up-regulation by vitamin A is conserved from nematodes to mammals and is critical for lifespan extension in Caenorhabditis elegans. Aging Cell, 23 (3). e14064. doi:10.1111/acel.14064 ISSN 1474-9726.
Pires-da Silva, André Francisco (2024) Comparative reproductive biology in nematodes. In: Encyclopedia of Reproduction. Elsevier.
Adams, Sally, Tandonnet, Sophie and Pires-da Silva, André Francisco (2024) Balancing selfing and outcrossing : the genetics and cell biology of nematodes with three sexual morphs. Genetics . ISSN 0016-6731. (In Press)
Pires-daSilva, Andre, Kelleher, Rhianne and Reynoldson, Luke (2024) Decoding lifespan secrets : the role of the gonad in C. elegans aging. Frontiers in Aging Neuroscience, 5 . 1380016. doi:10.3389/fragi.2024.1380016 ISSN 1663-4365.
Al-Yazeedi, Talal, Xu, Emily L., Kaur, Jasmin, Shakes, Diane and Pires da Silva, André (2022) Lagging X chromatids specify the orientation of asymmetric organelle partitioning in XX spermatocytes of Auanema rhodensis. Genetics, 222 (4). iyac159. doi:10.1093/genetics/iyac159 ISSN 0016-6731.
Adams, Sally, Pathak, Prachi, Kittelman, Maike, Jones, Alun R. C., Mallon, Eamonn B. and Pires-daSilva, Andre (2022) Sexual morph specialisation in a trioecious nematode balances opposing selective forces. Scientific Reports, 12 . 6402. doi:10.1038/s41598-022-09900-8 ISSN 2045-2322.
Tandonnet, Sophie, Haq, Maairah, Turner, Anisa, Grana, Theresa, Paganopoulou, Panagiota, Adams, Sally, Dhawan, Sandhya, Kanzaki, Natsumi, Nuez, Isabelle, Félix, Marie-Anne and Pires da Silva, André (2022) De novo genome assembly of Auanema melissensis, a trioecious free-living nematode. Journal of Nematology, 54 (1). e2022. doi:10.2478/jofnem-2022-0059 ISSN 0022-300X.
Robles, Pedro, Turner, Anisa, Zuco, Giusy, Adams, Sally, Paganopolou, Panagiota, Winton, Michael, Hill, Beth, Kache, Vikas, Bateson, Christine and Pires da Silva, André (2021) Parental energy-sensing pathways control intergenerational offspring sex determination in the nematode Auanema freiburgensis. BMC Biology, 19 (1). 102 . doi:10.1186/s12915-021-01032-1 ISSN 1741-7007.
Kranse, Olaf, Beasley, Helen, Adams, Sally, da Silva, Andre Pires, Bell, Chris, Lilley, Catherine, Urwin, Peter, Bird, David, Miska, Eric, Smant, Geert
et al.
(2021)
Towards genetic modification of plant-parasitic nematodes : delivery of macromolecules to adults and expression of exogenous mRNA in second stage juveniles. G3 Genes|Genomes|Genetics, 11 (2). jkaa058. ISSN 2160-1836 doi:
10.1093/g3journal/jkaa058
Shih, P -Y., Lee, J. S., Shinya, R., Kanzaki, N., Pires-da Silva, André Francisco, Badroos, J. M., Goetz, E., Sapir, A. and Sternberg, P. W. (2019) Newly identified nematodes from Mono Lake exhibit extreme arsenic resistance. Current Biology, 29 (19). 3339-3344.E4. doi:10.1016/j.cub.2019.08.024 ISSN 0960-9822.
Tandonnet, Sophie, Koutsovoulos, Georgios D., Adams, Sally, Cloarec, Delphine, Parihar, Manish, Blaxter, Mark L. and Pires-da Silva, André Francisco (2019) Chromosome-wide evolution and sex determination in the three-sexed nematode auanema rhodensis. G3 Genes|Genomes|Genetics, 9 (3). pp. 1211-1230. doi:10.1534/g3.119.0011 ISSN 2160-1836.
Adams, Sally, Pathak, Prachi, Shao, Hongguang, Lok, James B. and Pires-da Silva, André Francisco (2019) Liposome-based transfection enhances RNAi and CRISPR-1 mediated mutagenesis in non-model nematode systems. Scientific Reports, 9 . 483. doi:10.1038/s41598-018-37036-1 ISSN 2045-2322.
Tandonnet, Sophie, Farrell, Maureen C., Koutsovoulos, Georgios D., Blaxter, Mark L., Parihar, Manish, Sadler, Penny L., Shakes, Diane C. and Pires da Silva, André (2018) Sex- and gamete-specific patterns of X chromosome segregation in a trioecious nematode. Current Biology, 28 (1). pp. 93-99. doi:10.1016/j.cub.2017.11.037 ISSN 0960-9822.
Moreira-Pinto, Beatriz and Pires da Silva, André (2017) Comparative reproductive biology in nematodes. In: Reference Module in Life Sciences. Elsevier BV. ISBN 9780128096338
Pires da Silva, André (2017) Data for Sex- and gamete-specific patterns of X chromosome segregation in a trioecious nematode. [Dataset]
Tandonnet, Sophie, Farrell, Maureen C., Koutsovoulos, Georgios, Blaxter, Mark, Parihar, Manish, Sadler, Penny L., Shakes, Diane and Pires-da Silva, André Francisco (2017) Gender- and gamete-specific patterns of X chromosome segregation in a three-gendered nematode. Working Paper. BioRxiv: Cold Spring Harbour Laboratory. (Unpublished)
Ancell, Henry and Pires-da Silva, André Francisco (2017) Sex-specific lifespan and its evolution in nematodes. Seminars in Cell & Developmental Biology, 70 . pp. 122-129. doi:10.1016/j.semcdb.2017.05.012 ISSN 1084-9521.
Kanzaki, Natsumi, Kiontke, Karin, Tanaka, Ryusei, Schwarz, Anna, Müller-Reichert, Thomas, Chaudhuri, Jyotiska and Pires-da Silva, André Francisco (2017) Description of two three-gendered nematode species in the new genus Auanema (Rhabditina) that are models for reproductive mode evolution. Scientific Reports, 7 . 11135. doi:10.1038/s41598-017-09871-1 ISSN 2045-2322.
Winter, Ethan S., Schwarz, Anna, Fabig, Gunar, Feldman, Jessica L., Pires-da Silva, André Francisco, Müller-Reichert, Thomas, Sadler, Penny L. and Shakes, Diane C. (2017) Cytoskeletal variations in an asymmetric cell division support diversity in nematode sperm size and sex ratios. Development , 144 (18). pp. 3253-3263. doi:10.1242/dev.153841 ISSN 0950-1991.
Tandonnet, Sophie and Pires-da Silva, André Francisco (2016) Phenotypic plasticity and developmental innovations in nematodes. Current Opinion in Genetics and Development, 39 . pp. 8-13. doi:10.1016/j.gde.2016.05.018 ISSN 0959-437X.
Chaudhuri, Jyotiska, Bose, Neelanjan, Tandonnet, Sophie, Adams, Sally, Zuco, Giusy, Kache, Vikas, Parihar, Manish, Reuss, Stephan H. von, Schroeder, Frank C. and Pires-da Silva, André Francisco (2015) Mating dynamics in a nematode with three sexes and its evolutionary implications. Scientific Reports, 5 . pp. 1-10. 17676. doi:10.1038/srep17676 ISSN 2045-2322.
Pires-da Silva, André Francisco and Parihar, Manish (2012) Evo-devo of the germline and somatic gonad in nematodes. Sexual Development, Vol.7 (No.1-3). pp. 163-170. doi:10.1159/000337960 ISSN 1661-5425.
Shakes, Diane C., Neva, Bryan J., Huynh, Henry, Chaudhuri, Jyotiska and Pires-da Silva, André Francisco (2011) Asymmetric spermatocyte division as a mechanism for controlling sex ratios. Nature Communications, Vol.2 (No.1). Article no. 157. doi:10.1038/ncomms1160 ISSN 2041-1723.
Chaudhuri, Jyotiska, Kache, Vikas and Pires-da Silva, André Francisco (2011) Regulation of sexual plasticity in a nematode that produces males, females, and hermaphrodites. Current Biology, Vol.21 (No.18). pp. 1548-1551. doi:10.1016/j.cub.2011.08.009 ISSN 0960-9822.
Grbić, Miodrag, Van Leeuwen, Thomas, Clark, Richard M., Rombauts, Stephane, Rouzé, Pierre, Grbić, Vojislava, Osborne, Edward J., Dermauw, Wannes, Thi Ngoc, Phuong Cao, Ortego, Félix
et al.
(2011)
The genome of Tetranychus urticae reveals herbivorous pest adaptations. Nature, Vol.479 (No.7374). pp. 487-492. doi:
10.1038/nature10640 ISSN 0028-0836.
Chaudhuri, Jyotiska, Parihar, Manish and Pires-da Silva, André Francisco (2011) An introduction to Worm Lab : from culturing worms to mutagenesis. Journal of Visualized Experiments, Vol.47 . Article no. e2293. doi:10.3791/2293 ISSN 1940-087X.
Meik, Jesse M., Lawing, A. Michelle and Pires-da Silva, André Francisco (2010) Body size evolution in insular speckled rattlesnakes (Viperidae : Crotalus mitchellii). PLoS One, Volume 5 (Number 3). Article no. e9524. doi:10.1371/journal.pone.0009524 ISSN 1932-6203.
Meik, Jesse M. and Pires-da Silva, André Francisco (2009) Evolutionary morphology of the rattlesnake style. BMC Evolutionary Biology, Volume 9 (Number 1). Article no.35. doi:10.1186/1471-2148-9-35 ISSN 1471-2148.
Click, Arielle, Savaliya, Chandni H, Kienle, Simone, Herrmann, Matthias and Pires-da Silva, André Francisco (2009) Natural variation of outcrossing in the hermaphroditic nematode Pristionchus pacificus. BMC Evolutionary Biology, Volume 9 (Number 1). Article no.75. doi:10.1186/1471-2148-9-75 ISSN 1471-2148.
Long, T. and Pires-da Silva, André Francisco (2009) The snake box : a novel approach for safely restraining venomous snakes. The Herpetological Bulletin, Vol.108 . pp. 34-35.
Balastik, M., Ferraguti, F., Pires-da Silva, André Francisco, Lee, T. H., Alvarez-Bolado, G., Lu, K. P. and Gruss, P. (2008) Deficiency in ubiquitin ligase TRIM2 causes accumulation of neurofilament light chain and neurodegeneration. Proceedings of the National Academy of Sciences, Vol.105 (No.33). pp. 12016-12021. doi:10.1073/pnas.0802261105 ISSN 0027-8424.