Sheikh, Arsheed H., Zacharia, Iosif, Tabassum, Naheed, Hirt, Heribert and Ntoukakis, Vardis (2024) 14-3-3 proteins as a major hub for plant immunity. Trends in Plant Science, 29 (11). pp. 1245-1253. doi:10.1016/j.tplants.2024.06.001 ISSN 1360-1385.
Li, Xinan, Wang, Chao, Zhu, Xun, Ntoukakis, Vardis, Cernava, Tomislav and Jin, Decai (2023) Exploration of phyllosphere microbiomes in wheat varieties with differing aphid resistance. Environmental Microbiome, 18 (1). 78. doi:10.1186/s40793-023-00534-5 ISSN 2524-6372.
Osborne, Rory, Rehneke, Laura, Lehmann, Silke, Roberts, Jemma, Altmann, Melina, Altmann, Stefan, Zhang, Yingqi, Köpff, Eva, Dominguez-Ferreras, Ana, Okechukwu, Emeka, Sergaki, Chrysi, Rich-Griffin, Charlotte, Ntoukakis, Vardis, Eichmann, Ruth, Shan, Weixing, Falter-Braun, Pascal and Schäfer, Patrick (2023) Symbiont-host interactome mapping reveals effector-targeted modulation of hormone networks and activation of growth promotion. Nature Communications, 14 (1). 4065. doi:10.1038/s41467-023-39885-5 ISSN 2041-1723.
Tsitsekian, Dikran, Daras, Gerasimos, Templalexis, Dimitris, Avgeri, Fengoula, Lotos, Leonidas, Orfanidou, Chrysoula G., Ntoukakis, Vardis, Maliogka, Varvara I. and Rigas, Stamatis (2023) A subset of highly responsive transcription factors upon tomato infection by pepino mosaic virus. Plant Biology, 25 (4). pp. 529-540. doi:10.1111/plb.13515 ISSN 1435-8603.
Sheikh, Arsheed H., Zacharia, Iosif, Pardal, Alonso J., Dominguez-Ferreras, Ana, Sueldo, Daniela J., Kim, Jung-Gun, Balmuth, Alexi, Gutierrez, Jose R., Conlan, Brendon F., Ullah, Najeeb
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(2023)
Dynamic changes of the Prf/Pto tomato resistance complex following effector recognition. Nature Communications, 14 (1). 2568. doi:
10.1038/s41467-023-38103-6 ISSN 2041-1723.
Sertedakis, Matthaios, Kotsaridis, Konstantinos, Tsakiri, Dimitra, Mermigka, Glykeria, Dominguez‐Ferreras, Ana, Ntoukakis, Vardis and Sarris, Panagiotis F. (2022) Expression of putative effectors of different Xylella fastidiosa strains triggers cell death‐like responses in various Nicotiana model plants. Molecular Plant Pathology, 23 (1). pp. 148-156. doi:10.1111/mpp.13147 ISSN 1364-3703.
Tsitsekian, Dikran, Daras, Gerasimos, Karamanou, Konstantina, Templalexis, Dimitris, Koudounas, Konstantinos, Malliarakis, Dimitris, Koufakis, Theologos, Chatzopoulos, Dimitris, Goumas, Dimitris, Ntoukakis, Vardis, Hatzopoulos, Polydefkis and Rigas, Stamatis (2021) Clavibacter michiganensis downregulates photosynthesis and modifies monolignols metabolism revealing a crosstalk with tomato immune responses. International Journal of Molecular Sciences, 22 (16). e8442. doi:10.3390/ijms22168442 ISSN 1422-0067.
Greer, Shannon F., Vicente, Joana, Hussain, Rana Muhammad Fraz, Harrison, Jamie, Smith, Julian, Teakle, Graham R., Studholme, David J., Ntoukakis, Vardis and Grant, Murray (2021) Identification, characterisation and mapping of resistance to black rot (Xanthomonas campestris pv. campestris) in Brassica spp. In: Management of Diseases and Pests of Oilseed Rape, University of Hertfordshire, 16 Jun 2021. Published in: Proceedings of Management of Diseases and Pests of Oilseed Rape, University of Hertfordshire, 16 June 2021 p. 64.
Gkizi, Danai, González Gil, Anna, Pardal , Alonso Javier, Piquerez, Sophie J., Sergaki, Chrysi, Ntoukakis, Vardis and Tjamos, Sotirios E. (2021) The bacterial biocontrol agent Paenibacillus alvei K165 confers inherited resistance against Verticillium dahliae. Journal of Experimental Botany, 72 (12). pp. 4565-4576. doi:10.1093/jxb/erab154 ISSN 0022-0957.
Pardal, Alonso J., Piquerez, Sophie J. M., Dominguez-Ferreras, Ana, Frungillo, Lucas, Mastorakis, Emmanouil, Reilly, Emma, Latrasse, David, Concia, Lorenzo, Gimenez-Ibanez, Selena, Spoel, Steven H., Benhamed, Moussa and Ntoukakis, Vardis (2021) Immunity onset alters plant chromatin and utilizes EDA16 to regulate oxidative homeostasis. PLOS Pathogens, 17 (5). e1009572. doi:10.1371/journal.ppat.1009572 ISSN 1553-7374.
Lee, Morgan, Dominguez-Ferreras, Anna, Kaliyadasa, Ewon, Huang, Wei-Jie, Antony, Edna, Stevenson, Tracey, Lehmann, Silke, Schäfer, Patrick, Knight, Marc R., Ntoukakis, Vardis and Knight, Heather (2021) Mediator subunits MED16, MED14, and MED2 are required for activation of ABRE-dependent transcription in Arabidopsis. Frontiers in Plant Science, 12 . 649720. doi:10.3389/fpls.2021.649720 ISSN 1664-462X.
Bender, Kyle W., Couto, Daniel, Kadota, Yasuhiro, Macho, Alberto P., Sklenar, Jan, Derbyshire, Paul, Bjornson, Marta, DeFalco, Thomas A., Petriello, Annalise, Font Farre, Maria, Schwessinger, Benjamin, Ntoukakis, Vardis, Stransfeld, Lena, Jones, Alexandra M. E., Menke, Frank L. H. and Zipfel, Cyril (2021) Activation loop phosphorylaton of a non-RD receptor kinase initiates plant innate immune signaling. Proceedings of the National Academy of Sciences of the United States of America, 118 (38). e2108242118. doi:10.1073/pnas.2108242118 ISSN 0027-8424.
Kim, Soonkap, Piquerez, Sophie J. M. , Ramirez-Prado, Juan S., Mastorakis, Emmanouil, Veluchamy, Alaguraj, Latrasse, David , Manza-Mianza, Deborah, Brik-Chaouche, Rim , Huang, Ying, Rodriguez-Granados, Natalia Y.
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GCN5 modulates salicylic acid homeostasis by regulating H3K14ac levels at the 5ʹ and 3ʹ ends of its target genes. Nucleic Acids Research, 48 (11). pp. 5953-5966. doi:
10.1093/nar/gkaa369 ISSN 0305-1048.
Lehmann, Silke, Dominguez-Ferreras, Ana, Huang, Wei-Jie, Denby, Katherine J., Ntoukakis, Vardis and Schäfer, Patrick (2020) Novel markers for high-throughput protoplast-based analyses of phytohormone signaling. PLoS One, 15 (6). e0234154. doi:10.1371/journal.pone.0234154 ISSN 1932-6203.
Bianchet, Chantal, Wong, Aloysius, Quaglia, Mara, Alqurashi, May, Gehring, Chris, Ntoukakis, Vardis and Pasqualini, Stefania (2019) An Arabidopsis thaliana leucine-rich repeat protein harbors an adenylyl cyclase catalytic center and affects responses to pathogens. Journal of Plant Physiology, 232 . pp. 12-22. doi:10.1016/j.jplph.2018.10.025 ISSN 0176-1617.
Sheikh, A.H. and Ntoukakis, V. (2018) Mitogen-activated protein kinase activation after effector recognition in tomato. In: V INTERNATIONAL SYMPOSIUM ON TOMATO DISEASES: PERSPECTIVES AND FUTURE DIRECTIONS IN TOMATO PROTECTION , Malaga,Spain, June 13- June 16 2016. Published in: Acta Horticulturae (1207). pp. 99-104. doi:10.17660/ActaHortic.2018.1207.13 ISSN 0567-7572.
Gimenez-Ibanez, Selena, Boter, Marta, Ortigosa, Andrés, García-Casado, Gloria, Chini, Andrea, Lewsey, Mathew G., Ecker, Joseph R., Ntoukakis, Vardis and Solano, Roberto (2017) JAZ2 controls stomata dynamics during bacterial invasion. New Phytologist, 213 (3). pp. 1378-1392. doi:10.1111/nph.14354 ISSN 0028-646X.
Üstün, Suayib, Sheikh, Arsheed, Gimenez-Ibanez , Selena, Jones, Alexandra M., Ntoukakis, Vardis and Börnke, Frederik (2016) The proteasome acts as a hub for plant immunity and is targeted by Pseudomonas type-III effectors. Plant Physiology, 172 (3). 1941-1958 . doi:10.1104/pp.16.00808 ISSN 0032-0889.
Couto, Daniel, Niebergall, Roda, Liang, Xiangxiu, Bücherl, Christoph A., Sklenar, Jan, Macho, Alberto P., Ntoukakis, Vardis, Derbyshire, Paul, Altenbach, Denise, Maclean, Dan, Robatzek, Silke, Uhrig, Joachim, Menke, Frank, Zhou, Jian-Min and Zipfel, Cyril (2016) The Arabidopsis protein phosphatase PP2C38 negatively regulates the central immune kinase BIK1. PLoS Pathogens, 12 (8). e1005811. doi:10.1371/journal.ppat.1005811 ISSN 1553-7374.
Ntoukakis, Vardis and Gimenez-Ibanez, S. (2016) Parasitic plants--A CuRe for what ails thee. Science, 353 (6298). pp. 442-443. doi:10.1126/science.aag3111 ISSN 0036-8075.
Patron, Nicola J., Orzaez, Diego, Marillonnet, Sylvestre, Warzecha, Heribert, Matthewman, Colette, Youles, Mark, Raitskin, Oleg, Leveau, Aymeric, Farré, Gemma, Rogers, Christian
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Standards for plant synthetic biology : a common syntax for exchange of DNA parts. New Phytologist, 208 (1). pp. 13-19. doi:
10.1111/nph.13532 ISSN 0028-646X.
Rosa, S., Ntoukakis, Vardis, Ohmido, N., Pendle, A., Abranches, R. and Shaw, P. (2014) Cell differentiation and development in Arabidopsis are associated with changes in histone dynamics at the single-cell level. The Plant Cell, 26 (12). pp. 4821-4833. doi:10.1105/tpc.114.133793 ISSN 1040-4651.
Piquerez, Sophie J. M., Harvey, Sarah E., Beynon, Jim and Ntoukakis, Vardis (2014) Improving crop disease resistance : lessons from research on Arabidopsis and tomato. Frontiers in Plant Science, Volume 5 . pp. 1-13. Article number 671 . doi:10.3389/fpls.2014.00671 ISSN 1664-462X.
Segonzac, C., Macho, A. P., Sanmartin, M., Ntoukakis, Vardis, Sanchez-Serrano, J. J. and Zipfel, C. (2014) Negative control of BAK1 by protein phosphatase 2A during plant innate immunity. The EMBO Journal, 33 . pp. 2069-2079. doi:10.15252/embj.201488698 ISSN 0261-4189.
Ntoukakis, Vardis, Saur, Isabel M. L., Conlan, Brendon and Rathjen, John P. (2014) The changing of the guard : the Pto/Prf receptor complex of tomato and pathogen recognition. Current Opinion in Plant Biology, Volume 20 . pp. 69-74. doi:10.1016/j.pbi.2014.04.002 ISSN 1369-5266.
Kadota, Yasuhiro, Sklenar, Jan, Derbyshire, Paul, Stransfeld, Lena, Asai, Shuta, Ntoukakis, Vardis, Jones, Jonathan D. G., Shirasu, Ken, Menke, Frank, Jones, Alexandra M. and Zipfel, Cyril (2014) Direct regulation of the NADPH oxidase RBOHD by the PRR-associated kinase BIK1 during plant immunity. Molecular Cell, Volume 54 (Number 1). pp. 43-55. doi:10.1016/j.molcel.2014.02.021 ISSN 1097-2765.
Macho, A. P., Schwessinger, B., Ntoukakis, Vardis, Brutus, A., Segonzac, C., Roy, S., Kadota, Y., Oh, M. -H., Sklenar, J., Derbyshire, P., Lozano-Duran, R., Malinovsky, F. G., Monaghan, J., Menke, F. L., Huber, S. C., He, S. Y. and Zipfel, C. (2014) A bacterial tyrosine phosphatase inhibits plant pattern recognition receptor activation. Science, Volume 343 (Number 6178). pp. 1509-1512. doi:10.1126/science.1248849 ISSN 0036-8075.
Piquerez, Sophie J., Balmuth, Alexi L., Sklenář, Jan, Jones, Alexandra M., Rathjen, John P. and Ntoukakis, Vardis (2014) Identification of post-translational modifications of plant protein complexes. Journal of Visualized Experiments (Number 84). doi:10.3791/51095 ISSN 1940-087X.
Jones, Alexandra M., Monaghan, Jacqueline and Ntoukakis, Vardis (2013) Editorial : mechanisms regulating immunity in plants. Frontiers in Plant Science, Volume 4 . doi:10.3389/fpls.2013.00064 ISSN 1664-462X.
Ntoukakis, Vardis, Balmuth, Alexi L., Mucyn, Tatiana S., Gutierrez, Jose R., Jones, Alexandra M. and Rathjen, John P. (2013) The tomato Prf complex is a molecular trap for bacterial effectors based on Pto transphosphorylation. PLoS Pathogens, Vol.9 (No.1). Article no. e1003123. doi:10.1371/journal.ppat.1003123 ISSN 1553-7374.
Ntoukakis, Vardis, Schwessinger, B., Segonzac, C. and Zipfel, C. (2011) Cautionary Notes on the Use of C-Terminal BAK1 Fusion Proteins for Functional Studies. The Plant Cell, Vol. 23 (No. 11). pp. 3871-3878. doi:10.1105/tpc.111.090779 ISSN 1040-4651.
Guttman, David S., Schwessinger, Benjamin, Roux, Milena, Kadota, Yasuhiro, Ntoukakis, Vardis, Sklenar, Jan, Jones, Alexandra M. and Zipfel, Cyril (2011) Phosphorylation-Dependent Differential Regulation of Plant Growth, Cell Death, and Innate Immunity by the Regulatory Receptor-Like Kinase BAK1. PLoS Genetics, Vol. 7 (No. 4). e1002046. doi:10.1371/journal.pgen.1002046 ISSN 1553-7404.
Gutierrez, Jose R., Balmuth, Alexi L., Ntoukakis, Vardis, Mucyn, Tatiana S., Gimenez-Ibanez, Selena, Jones, Alexandra M. and Rathjen, John P. (2010) Prf immune complexes of tomato are oligomeric and contain multiple Pto-like kinases that diversify effector recognition. The Plant Journal, Vol. 61 (No. 3). pp. 507-518. doi:10.1111/j.1365-313X.2009.04078.x ISSN 09607412.
Ntoukakis, Vardis, Mucyn, T. S., Gimenez-Ibanez, S., Chapman, H. C., Gutierrez, J. R., Balmuth, Alexi L., Jones, Alexandra M. and Rathjen, J. P. (2009) Host inhibition of a bacterial virulence effector triggers immunity to infection. Science, Volume 324 (Number 5928). pp. 784-787. doi:10.1126/science.1169430 ISSN 0036-8075.
Gimenez-Ibanez, Selena, Hann, Dagmar R., Ntoukakis, Vardis, Petutschnig, Elena, Lipka, Volker and Rathjen, John P. (2009) AvrPtoB Targets the LysM Receptor Kinase CERK1 to Promote Bacterial Virulence on Plants. Current Biology, Vol. 19 (No. 5). pp. 423-429. doi:10.1016/j.cub.2009.01.054 ISSN 09609822.
Gimenez-Ibanez, Selena, Ntoukakis, Vardis and Rathjen, John P. (2009) The LysM receptor kinase CERK1 mediates bacterial perception in Arabidopsis. Plant Signaling & Behavior, Vol. 4 (No. 6). pp. 539-541. doi:10.4161/psb.4.6.8697 ISSN 1559-2316.